Auto/threads/error.al

here for a quick overview of the site Help Center Detailed answers to any questions you might have Meta Discuss the workings and policies of this site About Us Learn more about Stack Overflow the company Business Learn more about hiring developers or posting ads with us Stack Overflow Questions Jobs Documentation Tags Users Badges Ask Question x Dismiss Join the Stack Overflow Community Stack Overflow is a community of 4.7 million programmers, just like you, helping each other. Join them; it only takes a minute: Sign up How to fix this Perl Library Missing Error: “Can't locate auto/threads/error.al in @INC”? up vote 0 down vote favorite I am running a trinity RNASeq Assembly software on Ubuntu server and the following error is occuring for Pair-end reads input. can't locate auto/threads/error.al in @INC (@INC contains: I checked for threads library and it's already in the perl library. Any thoughts on this? $ perl -V Summary of my perl5 (revision 5 version 8 subversion 8) configuration: Platform: osname=linux, osvers=2.6.9-42.0.3.elsmp, archname=x86_64-linux-thread-multi uname='linux builder6.centos.org 2.6.9-42.0.3.elsmp #1 smp fri oct 6 06:28:26 cdt 2006 x86_64 x86_64 x86_64 gnulinux ' config_args='-des -Doptimize=-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -Dversion=5.8.8 -Dmyhostname=localhost -Dperladmin=root@localhost -Dcc=gcc -Dcf_by=Red Hat, Inc. -Dinstallprefix=/usr -Dprefix=/usr -Dlibpth=/usr/local/lib64 /lib64 /usr/lib64 -Dprivlib=/usr/lib/perl5/5.8.8 -Dsitelib=/usr/lib/perl5/site_perl/5.8.8 -Dvendorlib=/usr/lib/perl5/vendor_perl/5.8.8 -Darchlib=/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi -Dsitearch=/usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi -Dvendorarch=/usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi -Darchname=x86_64-linux -Dvendorprefix=/usr -Dsiteprefix=/usr -Duseshrplib -Dusethreads -Duseithreads -Duselargefiles -Dd_dosuid -Dd_semctl_semun -Di_db -Ui_ndbm -Di_gdbm -Di_shadow -Di_syslog -Dman3ext=3pm -Duseperlio -Dinstallusrbinperl=n -Ubincompat5005 -Uversiononly -Dpager=/usr/bin/less -isr -Dd_gethostent_r_proto -Ud_end

access. Click here to register now, and join the discussion Community Links Members List Search Forums Show Threads Show Posts Tag Search Advanced Search Go to Page... Similar Threads Thread Thread Starter Forum Replies Last Post help with trinity and jellyfish bongbimit Bioinformatics 2 05-13-2015 02:01 AM Trinity installation error on Mac OSX Marvericks Agrias Bioinformatics 0 03-07-2014 http://stackoverflow.com/questions/26903755/how-to-fix-this-perl-library-missing-error-cant-locate-auto-threads-error-al 10:31 AM Trinity Help dmacmillan De novo discovery 5 05-11-2012 11:20 AM Using Trinity package aevgup RNA Sequencing 8 02-04-2012 02:15 AM trinity error ECHo Bioinformatics 3 11-30-2011 12:29 PM Thread Tools 08-05-2014, 11:22 PM #1 cli Member Location: USA Join Date: Mar http://seqanswers.com/forums/showthread.php?t=45610 2011 Posts: 26 help with Trinity installation Dear all, We want to install Trinity on our cluster, which is under x86_64-redhat-linux, Thread model: posix, gcc version 4.1.2 20080704 (Red Hat 4.1.2-50). When I tried to compile Trinity, I got errors: Use of inherited AUTOLOAD for non-method Autom4te::XFile::msg() is deprecated at /usr/share/autoconf/Autom4te/XFile.pm line 238. Can't locate auto/Autom4te/XFile/msg.al in @INC (@INC contains: /usr/share/autoconf /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/site_perl/5.8.8 /usr/lib/perl5/site_perl /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/vendor_perl/5.8.8 /usr/lib/perl5/vendor_perl /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/5.8.8 .) at /usr/share/autoconf/Autom4te/XFile.pm line 238 aclocal-1.9: autom4te failed with exit status: 1 make[1]: *** [aclocal.m4] Error 1 make[1]: Leaving directory `/ocean/rhome/lichenhong/trinityrnaseq_r20140413p1/Inchworm' make: *** [inchworm_target] Error 2 Does anyone know what was the problem and how to fix it? Or if you have compiled executables that we could use, it would be greatly appreciated. We really need the cluster to do the job in time. Thank you in a

Plans & Pricing Partners Support Resources Preview Forums Forums Quick Links Search Forums New Posts Search titles https://forums.cpanel.net/threads/error-al-abrir-cpanel.522621/ only Posted by Member: Separate names with a comma. Newer Than: https://rt.cpan.org/Ticket/Display.html?id=21777 Search this thread only Search this forum only Display results as threads More... Useful Searches Recent Posts Resources Resources Quick Links Search Resources Most Active Authors Latest Reviews Feature Requests Defects Menu Log in Sign up The Community Forums Interact with an entire community of cPanel & WHM users! cPanel Forums > cPanel & WHM® (for Linux® Servers) > International Discussions > Discusión en Español > This site uses cookies. By continuing to use this site, you are agreeing to our use of cookies. Learn More. Error al abrir cPanel Discussion in 'Discusión en Español' started by Oscar Antolinez, Jan 26, 2016. Oscar Antolinez Registered Joined: Jan 26, 2016 Messages: 1 Likes Received: 0 Trophy Points: 1 Location: Colombia cPanel Access Level: Root Administrator Cuando abro cualquier cpanel en el servidor aparece el siguiente error: Code: A fatal error or timeout occurred while processing this directive. Template::Exception: [TYPE]=[undef] [INFO]=[Branding::get_available_applications(HASH(0x5845208)) failed: (XID 8tccfn) The system failed to parse the JSON stream from the file “/usr/local/cpanel/base/frontend/paper_lantern//dynamicui.conf” because of an error: garbage after JSON object, at character offset 40053 (before "file=>lverubysel,ski...") at /usr/local/cpanel/Cpanel/JSON.pm line 119, <$_[...]> line 1. ] [TEXT]=[