Logistic Regression Standard Error Of Coefficients
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Standard Error Regression
are voted up and rise to the top How to compute the standard errors of a logistic regression's coefficients up vote 5 down vote favorite 1 I am using Python's scikit-learn to train and test a logistic regression. scikit-learn returns the regression's coefficients of the independent variables, but it does not provide the coefficients' standard errors. I need these standard errors to compute a Wald statistic for each coefficient and, in wald test logistic regression turn, compare these coefficients to each other. I have found one description of how to compute standard errors for the coefficients of a logistic regression (here), but it is somewhat difficult to follow. If you happen to know of a simple, succint explanation of how to compute these standard errors and/or can provide me with one, I'd really appreciate it! I don't mean specific code (though please feel free to post any code that might be helpful), but rather an algorithmic explanation of the steps involved. logistic python standard-error regression-coefficients scikit-learn share|improve this question edited Mar 10 '14 at 18:13 asked Mar 10 '14 at 16:10 Gyan Veda 261415 1 Are you asking for Python code to get the standard errors, or for how the SEs are computed (mathematically / algorithmically) so that you can do it yourself? If the former, this Q would be off-topic for CV (see our help center), but may be on-topic on Stack Overflow. If the latter, it would be on-topic here (but you may not get any code suggestions). Please edit your Q to clarify this. If it is the former, we can migrate it to SO for you (please don't cross-post, though). –gung Mar 10 '14 at 17:01 1 Thanks, Gung. I pu
standard errors into odds ratios is trivial in Stata: just add ,
Logistic Regression Coefficient
or to the end of a logit command: .
Standard Error Of Estimate
use "http://www.ats.ucla.edu/stat/data/hsbdemo", clear . logit honors i.female math read, or Logistic regression Number of python logistic regression obs = 200 LR chi2(3) = 80.87 Prob > chi2 = 0.0000 Log likelihood = -75.209827 Pseudo R2 = 0.3496 ------------------------------------------------------------------------------ honors http://stats.stackexchange.com/questions/89484/how-to-compute-the-standard-errors-of-a-logistic-regressions-coefficients | Odds Ratio Std. Err. z P>|z| [95% Conf. Interval] -------------+---------------------------------------------------------------- female | female | 3.173393 1.377573 2.66 0.008 1.35524 7.430728 math | 1.140779 .0370323 4.06 0.000 1.070458 1.21572 read | 1.078145 .029733 2.73 0.006 1.021417 1.138025 _cons | 1.99e-06 3.68e-06 -7.09 0.000 5.29e-08 .0000749 ------------------------------------------------------------------------------ https://www.andrewheiss.com/blog/2016/04/25/convert-logistic-regression-standard-errors-to-odds-ratios-with-r/ Doing the same thing in R is a little trickier. Calculating odds ratios for coefficients is trivial, and exp(coef(model)) gives the same results as Stata: # Load libraries library(dplyr) # Data frame manipulation library(readr) # Read CSVs nicely library(broom) # Convert models to data frames # Use treatment contrasts instead of polynomial contrasts for ordered factors options(contrasts=rep("contr.treatment", 2)) # Load and clean data df <- read_csv("http://www.ats.ucla.edu/stat/data/hsbdemo.csv") %>% mutate(honors = factor(honors, levels=c("not enrolled", "enrolled")), female = factor(female, levels=c("male", "female"), ordered=TRUE)) # Run model model <- glm(honors ~ female + math + read, data=df, family=binomial(link="logit")) summary(model) #> #> Call: #> glm(formula = honors ~ female + math + read, family = binomial(link = "logit"), #> data = df) #> #> Deviance Residuals: #> Min 1Q Median 3Q Max #> -2.0055 -0.6061 -0.2730 0.4844 2.3953 #> #> Co
model Generalized linear model Discrete choice Logistic regression Multinomial logit Mixed logit Probit Multinomial probit Ordered logit Ordered probit Poisson Multilevel model Fixed https://en.wikipedia.org/wiki/Logistic_regression effects Random effects Mixed model Nonlinear regression Nonparametric Semiparametric Robust Quantile Isotonic Principal components Least angle Local Segmented Errors-in-variables Estimation Least squares Ordinary least squares Linear (math) Partial Total Generalized Weighted Non-linear Non-negative Iteratively reweighted Ridge regression Least absolute deviations Bayesian Bayesian multivariate Background Regression model validation Mean and predicted response Errors and residuals logistic regression Goodness of fit Studentized residual Gauss–Markov theorem Statistics portal v t e "Logit model" redirects here. It is not to be confused with Logit function. In statistics, logistic regression, or logit regression, or logit model[1] is a regression model where the dependent variable (DV) is categorical. This article covers the case of binary standard error of dependent variables—that is, where it can take only two values, such as pass/fail, win/lose, alive/dead or healthy/sick. Cases with more than two categories are referred to as multinomial logistic regression, or, if the multiple categories are ordered, as ordinal logistic regression.[2] Logistic regression was developed by statistician David Cox in 1958.[2][3] The binary logistic model is used to estimate the probability of a binary response based on one or more predictor (or independent) variables (features). As such it is not a classification method. It could be called a qualitative response/discrete choice model in the terminology of economics. Logistic regression measures the relationship between the categorical dependent variable and one or more independent variables by estimating probabilities using a logistic function, which is the cumulative logistic distribution. Thus, it treats the same set of problems as probit regression using similar techniques, with the latter using a cumulative normal distribution curve instead. Equivalently, in the latent variable interpretations of these two
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