Add Error Bars To A Bar Chart In R
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Matlab Add Error Bars To Bar Graph
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to create a barplot with SEM error bars Aubrie Holman SubscribeSubscribedUnsubscribe Loading... Loading... Working... Add to Want to watch this again later? Sign in to add this video to a playlist. Sign in Share More Report Need
Vertical Error Bars In Excel
to report the video? Sign in to report inappropriate content. Sign in Transcript barplot with error bars ggplot2 Statistics 2,193 views 5 Like this video? Sign in to make your opinion count. Sign in 6 1 Don't error.bar function r like this video? Sign in to make your opinion count. Sign in 2 Loading... Loading... Transcript The interactive transcript could not be loaded. Loading... Loading... Rating is available when the video has been https://www.r-bloggers.com/bar-plot-with-error-bars-in-r/ rented. This feature is not available right now. Please try again later. Published on Oct 30, 2015 Category Education License Standard YouTube License Loading... Autoplay When autoplay is enabled, a suggested video will automatically play next. Up next Learn R - Bar Charts with Error Bars in Ggplot2 - Duration: 27:28. Erin Buchanan 3,162 views 27:28 R Statistics tutorial: Creating bar charts for categorical variables | https://www.youtube.com/watch?v=4Y3ZjFRwMX0 lynda.com - Duration: 9:06. Lynda.com 1,906 views 9:06 Learn R - Line Graphs with Error Bars in Ggplot2 - Duration: 34:05. Erin Buchanan 1,386 views 34:05 Creating a Basic Bar Plot in R (Data Science & Statistics) - Duration: 24:34. Tim Layton 965 views 24:34 Plotting in R tutorial: Gorgeous graphs with ggplot2 - Duration: 32:05. deltaDNA 24,170 views 32:05 Creating Barplots in RStudio - Duration: 4:38. UTSSC 10,610 views 4:38 R Tutorial - Customizing Your Plots In R - Duration: 4:30. DataCamp 984 views 4:30 Excel Graphs With Error Bars Tutorial By Nestor Matthews - Duration: 14:12. Nestor Matthews 12,819 views 14:12 R tutorial: Creating bar charts for categorical variables | lynda.com - Duration: 13:21. Lynda.com 9,849 views 13:21 Constructing and plotting confidence intervals for means in R - Duration: 8:32. iquit-vids 4,935 views 8:32 Types of error-bars for mean: SD SE CI - Duration: 9:29. Ayumi Shintani 2,208 views 9:29 Graphs and Error bars with Numbers - Duration: 7:07. Amanda M. Noller 9,346 views 7:07 Standard Deviation using R Programming - Statistics Tutorial - Duration: 3:39. Edward Kench 11,243 views 3:39 Descriptive Statistics in R: Mean, Standard Deviation, Frequencies, etc (R Tutorial 2.7)
here for a quick overview of the site Help Center Detailed answers http://stackoverflow.com/questions/29768219/grouped-barplot-in-r-with-error-bars to any questions you might have Meta Discuss the workings http://stackoverflow.com/questions/18561066/adding-error-bars-to-a-bar-plot-in-r-using-calculated-standard-errors and policies of this site About Us Learn more about Stack Overflow the company Business Learn more about hiring developers or posting ads with us Stack Overflow Questions Jobs Documentation Tags Users Badges Ask Question x Dismiss Join the Stack Overflow error bars Community Stack Overflow is a community of 4.7 million programmers, just like you, helping each other. Join them; it only takes a minute: Sign up Grouped barplot in R with error bars up vote 4 down vote favorite 1 Dear Stackoverflow users, I would like to draw a grouped barplot add error bars with error bars. Here is the kind of figure I have been able to get up to now, and this is ok for what I need: And here is my script: #create dataframe Gene<-c("Gene1","Gene2","Gene1","Gene2") count1<-c(12,14,16,34) count2<-c(4,7,9,23) count3<-c(36,22,54,12) count4<-c(12,24,35,23) Species<-c("A","A","B","B") df<-data.frame(Gene,count1,count2,count3,count4,Species) df mean1<-mean(as.numeric(df[1,][c(2,3,4,5)])) mean2<-mean(as.numeric(df[2,][c(2,3,4,5)])) mean3<-mean(as.numeric(df[3,][c(2,3,4,5)])) mean4<-mean(as.numeric(df[4,][c(2,3,4,5)])) Gene1SpeciesA.stdev<-sd(as.numeric(df[1,][c(2,3,4,5)])) Gene2SpeciesA.stdev<-sd(as.numeric(df[2,][c(2,3,4,5)])) Gene1SpeciesB.stdev<-sd(as.numeric(df[3,][c(2,3,4,5)])) Gene2SpeciesB.stdev<-sd(as.numeric(df[4,][c(2,3,4,5)])) ToPlot<-c(mean1,mean2,mean3,mean4) #plot barplot plot<-matrix(ToPlot,2,2,byrow=TRUE) #with 2 being replaced by the number of genes! tplot<-t(plot) BarPlot <- barplot(tplot, beside=TRUE,ylab="count", names.arg=c("Gene1","Gene2"),col=c("blue","red")) #add legend legend("topright", legend = c("SpeciesA","SpeciesB"), fill = c("blue","red")) #add error bars ee<-matrix(c(Gene1SpeciesA.stdev,Gene2SpeciesA.stdev,Gene1SpeciesB.stdev,Gene2SpeciesB.stdev),2,2,byrow=TRUE)*1.96/sqrt(4) tee<-t(ee) error.bar(BarPlot,tplot,tee) The problem is that I need to do this for 50 genes, and 4 species, so my script is gonna get super super long and I guess this is not optimized... I tried to find help here but I can't figure out a better way to do what I'd like. If I did not need error bars I could adapt this script but the tricky part i
here for a quick overview of the site Help Center Detailed answers to any questions you might have Meta Discuss the workings and policies of this site About Us Learn more about Stack Overflow the company Business Learn more about hiring developers or posting ads with us Stack Overflow Questions Jobs Documentation Tags Users Badges Ask Question x Dismiss Join the Stack Overflow Community Stack Overflow is a community of 4.7 million programmers, just like you, helping each other. Join them; it only takes a minute: Sign up Adding error bars to a bar plot in R using calculated standard errors up vote 2 down vote favorite I created the barplot using two columns from a text file which also has a third column for standard errors. I used barplot() for this. How do I add error bars using my column, se, from my text file? I tried using error.bar() but that didn't work. r bar-chart share|improve this question edited Sep 1 '13 at 17:39 sgibb 16.1k12749 asked Sep 1 '13 at 17:36 user2714330 45127 2 Welcome on SO! Please read How to make a great R reproducible example?. –sgibb Sep 1 '13 at 17:39 add a comment| 1 Answer 1 active oldest votes up vote 1 down vote accepted You are asking for "dynamite plots": http://emdbolker.wikidot.com/blog:dynamite and http://biostat.mc.vanderbilt.edu/wiki/Main/DynamitePlots share|improve this answer answered Sep 1 '13 at 17:50 42- 165k8145275 Thanks for your help DWin! –user2714330 Sep 1 '13 at 18:28 Thanks for the checkmark, but this answer is arguably a link-only answer and probably should have been deleted. –42- Nov 14 '14 at 19:31 add a comment| Your Answer draft saved draft discarded Sign up or log in Sign up using Google Sign up using Facebook Sign up using Email and Password Post as a guest Name Email Post as a guest Name Email discard By posting your answer, you agree to the privacy policy and terms of service. Not the answer you're looking for? Browse other questions tagged r bar-chart or ask your own question. asked 3 years ago viewed 3008 times active 3 years ago Linked 1522 How to make a great R reproducible example? Related 0R bar plot with hour breaks from datetime0Separate Condition based coloring of different columns in bar-plot in R1How do I add error bars in this bar plot?1how to make barplot bars same size in plot