Error Bars In R Plots
Contents |
here for a quick overview of the site Help Center Detailed answers to any questions you might have Meta Discuss the workings and error.bar function r policies of this site About Us Learn more about Stack Overflow the error bars in r barplot company Business Learn more about hiring developers or posting ads with us Stack Overflow Questions Jobs Documentation Tags
Errbar R
Users Badges Ask Question x Dismiss Join the Stack Overflow Community Stack Overflow is a community of 4.7 million programmers, just like you, helping each other. Join them; it only
Scatter Plot With Error Bars In R
takes a minute: Sign up Add error bars to show standard deviation on a plot in R up vote 23 down vote favorite 10 For each X-value I calculated the average Y-value and the standard deviation (sd) of each Y-value x = 1:5 y = c(1.1, 1.5, 2.9, 3.8, 5.2) sd = c(0.1, 0.3, 0.2, 0.2, 0.4) plot (x, y) How error bars in ggplot2 can I use the standard deviation to add error bars to each datapoint of my plot? r plot statistics standard-deviation share|improve this question edited Oct 16 '14 at 3:43 Craig Finch 11417 asked Feb 25 '13 at 8:59 John Garreth 4572413 also see plotrix::plotCI –Ben Bolker Feb 25 '13 at 15:13 add a comment| 5 Answers 5 active oldest votes up vote 16 down vote accepted A Problem with csgillespie solution appears, when You have an logarithmic X axis. The you will have a different length of the small bars on the right an the left side (the epsilon follows the x-values). You should better use the errbar function from the Hmisc package: d = data.frame( x = c(1:5) , y = c(1.1, 1.5, 2.9, 3.8, 5.2) , sd = c(0.2, 0.3, 0.2, 0.0, 0.4) ) ##install.packages("Hmisc", dependencies=T) library("Hmisc") # add error bars (without adjusting yrange) plot(d$x, d$y, type="n") with ( data = d , expr = errbar(x, y, y+sd, y-sd, add=T, pch=1, cap=.1) ) # new plot (adjusts Yrange automatically) with ( data = d ,
|| is.character(x)) "" else as.character(substitute(y)), add=FALSE, lty=1, type='p', ylim=NULL, lwd=1, pch=16, Type=rep(1, length(y)), ...) Arguments x vector of numeric x-axis values (for vertical
Summaryse R
error bars) or a factor or character variable (for horizontal error r arrows bars, x representing the group labels) y vector of y-axis values. yplus vector of y-axis values: the plot mean and standard deviation in r tops of the error bars. yminus vector of y-axis values: the bottoms of the error bars. cap the width of the little lines at the tops and bottoms http://stackoverflow.com/questions/15063287/add-error-bars-to-show-standard-deviation-on-a-plot-in-r of the error bars in units of the width of the plot. Defaults to 0.015. main a main title for the plot, see also title. sub a sub title for the plot. xlab optional x-axis labels if add=FALSE. ylab optional y-axis labels if add=FALSE. Defaults to blank for horizontal charts. add set to TRUE to add http://svitsrv25.epfl.ch/R-doc/library/Hmisc/html/errbar.html bars to an existing plot (available only for vertical error bars) lty type of line for error bars type type of point. Use type="b" to connect dots. ylim y-axis limits. Default is to use range of y, yminus, and yplus. For horizonal charts, ylim is really the x-axis range, excluding differences. lwd line width for line segments (not main line) pch character to use as the point. Type used for horizontal bars only. Is an integer vector with values 1 if corresponding values represent simple estimates, 2 if they represent differences. ... other parameters passed to all graphics functions. Details errbar adds vertical error bars to an existing plot or makes a new plot with error bars. It can also make a horizontal error bar plot that shows error bars for group differences as well as bars for groups. For the latter type of plot, the lower x-axis scale corresponds to group estimates and the upper scale corresponds to differences. The spacings of the two scales are identical bu
Build charts in a breeze with our online editor. Real-time Support. Get instant chat support from our awesome engineering team. plotly Pricing PLOTCON NYC API Sign In SIGN UP + NEW PROJECT UPGRADE REQUEST DEMO Feed Pricing Make a Chart error bars API Sign In SIGN UP + NEW PROJECT UPGRADE REQUEST DEMO Show Sidebar Hide Sidebar Help API Libraries R Error Bars Fork on Github Navigation Back to R Error Bars in R How to add error bars to scatter plots in error bars in R. R matplotlib Python plotly.js Pandas node.js MATLAB Error Bars library(dplyr) library(plotly) p <- ggplot2::mpg %>% group_by(class) %>% summarise(mn = mean(hwy), sd = 1.96 * sd(hwy)) %>% arrange(desc(mn)) %>% plot_ly(x = class, y = mn, error_y = list(array = sd), mode = "markers", name = "Highway") %>% layout