Error Formatting Macro Latex Java.lang.nullpointerexception
Page History Restrictions Page Information Resolved comments Link to this Page… View in Hierarchy View Source Export to PDF Export to Word Copy Page Tree Community Bubbles Plugin … Community Bubbles Plugin Community Bubbles Documentation for Confluence 4.x versions and below Community Bubbles Support Forum Archive Error formatting macro forum java.lang.NullPointerException Skip to end of metadata Created by Unknown User (gabriel.soltz@uvcms.com), last modified by Guy Fraser on May 08, 2009 Go to start of metadata I m trying to implement Forum at our Confluence Wiki, but im geting this error: Error formatting macro: forum: java.lang.NullPointerException I create a new space, with a "Forum" page, and some topics like "child" pages. When i see Confluence logs, i get: 2009-05-07 15:30:04,236 DEBUG [ajp-8009-2] [atlassian.confluence.core.LuceneSmartListManager] extractResults Extracting Results. Hits.length = 6, max returned = 10 2009-05-07 15:30:04,237 DEBUG [ajp-8009-2] [atlassian.confluence.core.LuceneSmartListManager] extractResults loadObjects = false 2009-05-07 15:30:09,220 DEBUG [ajp-8009-2] [atlassian.confluence.core.DefaultContentPropertyManager] cacheGet Negative cache hit for id: 4489246 key: com.adaptavist.bubbles.forum.FORUM_ROOT_PAGE 2009-05-07 15:30:09,232 DEBUG [ajp-8009-2] [atlassian.confluence.core.DefaultContentPropertyManager] cacheGet Negative cache hit for id: 4489248 key: confluence.excerpt 2009-05-07 15:30:09,244 ERROR [ajp-8009-2] [renderer.v2.components.MacroRendererComponent] processMacro Unexpected error formatting macro: forum -- url: /confluence/display/rm/Forum | userName: gsoltz | action: viewpage | page: 4489246 java.lang.NullPointerException at com.adaptavist.confluence.bubbles.forum.macros.ForumMacro.execute(ForumMacro.java:299) at com.atlassian.renderer.v2.macro.ResourceAwareMacroDecorator.execute(ResourceAwareMacroDecorator.java:45) at com.atlassian.renderer.v2.components.MacroRendererComponent.executeMacro(MacroRendererComponent.java:297) at com.atlassian.renderer.v2.components.MacroRendererComponent.processMacro(MacroRendererComponent.java:255) at com.atlassian.renderer.v2.components.MacroRendererComponent.makeMacro(MacroRendererComponent.java:151) at com.atlassian.renderer.v2.components.WikiContentRendererHandler.handleMacro(WikiContentRendererHandler.java:18) at com.atlassian.renderer.v2.WikiMarkupParser.make
About Confluence Log in Sign up LaTeX PluginPagesBlogQuestionsChild pagesPagesLaTeX PluginComplex LaTeX ExampleBrowse pagesConfigureSpace tools Attachments (7) Page History Page Information Resolved comments Link to this Page… View in Hierarchy View Source Export to PDF Export to Word Pages Skip to end of banner JIRA links Go to start of banner LaTeX Plugin Skip to end of metadata Created by System Administrator, last modified by Andy Brook on Nov 10, 2010 Go to start of metadata Unknown macro: {repository-plugin} SVN project, branches, tags, trunk, all jars In https://www.adaptavist.com/doco/display/Bubbles/Error+formatting+macro+forum+java.lang.NullPointerException order to make this plugin available for Confluence 3.x, ownership of the plugin has been taken on by ([~javahollic]) and my 1.3 branch has been published as v1.3. I don't work for Stepstone, that reference remains to give kudos to the original authors. This plug-in can be installed and updated via the [Confluence Repository Client]. However, see the instructions below for https://thepluginpeople.atlassian.net/wiki/display/CLATEX/LaTeX+Plugin adding the necessary configuration files and installing TeX before using the LaTeX plug-in. Description/Features A plug-in for displaying LaTeX in Confluence. (Requires TeX to be installed separately.) Prerequisites You must have a working version of TeX installed on your Confluence server, and The commands latex and dvipng must be reachable by the $PATH system environment variable. Both latex and divpng are included in many TeX distributions. Ubuntu 10.10 install steps sudo apt-get install dvipng sudo apt-get install texlive-latex-base sudo apt-get install texlive-extra-utils sudo apt-get install texlive-math-extra sudo apt-get install mimetex There are many many more tex packages you could install and reference... It's a great idea to test your environment before installing the LaTeX plug-in. Make sure you generate a PNG file from a valid latex file at the command line. For instance, download simple.tex and type the following: latex simple.tex dvipng simple.dvi This should generate a file named simple.png containing a familiar equation: If not, you'll need to troubleshoot your TeX installation before continuing. Try http://www.tug.org/tetex/ and http://sourceforge.net/projects/dvipng/ for more information. (Mac OS X users might prefer the handy Ma
Page History Restrictions Page Information Resolved comments Link to this Page… View in Hierarchy View Source Export to PDF Export to Word Flux Simulator … Home http://sammeth.net/confluence/display/SIM/Stil+an+error+while+preparing+sequences Appendix D - Forum D.1 - General Questions Stil an error while http://stackoverflow.com/questions/26590918/play-2-3-implicit-json-conversion-causes-null-pointer-exception preparing sequences Skip to end of metadata Created by a cz on Jul 23, 2014 Go to start of metadata i still got an error while preparing transcript sequence during PCR distribution:I just want to get a simple human experiment with 2 groups 3 replicates (fastq error formatting files) each. Some of them should be even expressed between groups and some should be highly different expressed. How can i acomplish this? My genome: Homo_sapiens.GRCh37.73.dna.primary_assembly.faMy gtf:gencode.v18the key error, i think:and i dont want to alter my genome file, because the position wont match anymore with the gtf-file:[INFO] Loading default PCR distribution preparing transcript sequences ERROR[ERROR] Error while error formatting macro preparing sequences: Problems reading sequence chr1: pos -1, len 124,check whether chromosomal sequence exists / has the correct size [INFO] Flux-Simulator v1.2.2-20140614022955 (Flux Library: 1.30-20140614022955)[INFO] No mode selected, executing the full pipeline (-x -l -s)[INFO] I am collecting information on the run. initializing profiler **********[CAUTION] I overwrite the expression values in file parameters.pro, please confirm: (Yes,No,Don't know) Yes[INFO] Reading error model 76 bases model[WARN] The error model supports a read length of 76 butyou are trying to create reads of length 36. We are scaling.[INFO] Checking GTF file Checking GTF *[WARN] Unsorted in line 5 - cannot perform gene clustering: chr1 + ENST00000591440.1 @ 719750 after ENST00000590848.1 @ 728262 Checking GTF ********** OK (00:00:00)[GTF FILE] The GTF reference file given is not sorted, but we found a sorted version.[GTF FILE] The Simulator will use /mountpoints/wntshare/project/aczerny/Untitled_Folder/filtered_gtf_v18_sorted.gtf[GTF FILE] You might want to update your parameters file[PROFILING] I am assigning the expression profile Checking GTF ********** OK (00:00:00) Reading reference annotation OK (00:00:00) found 144 transcripts[PROFILING] Parameters NB_MOLECULES 100000 EXPRESSION_K -0.6 EXPRESSION_X0 9500.0 EXPRESSION_X1 9.025E
here for a quick overview of the site Help Center Detailed answers to any questions you might have Meta Discuss the workings and policies of this site About Us Learn more about Stack Overflow the company Business Learn more about hiring developers or posting ads with us Stack Overflow Questions Jobs Documentation Tags Users Badges Ask Question x Dismiss Join the Stack Overflow Community Stack Overflow is a community of 4.7 million programmers, just like you, helping each other. Join them; it only takes a minute: Sign up Play 2.3 implicit json conversion causes null pointer exception up vote 10 down vote favorite 2 I'm trying to parse json into my case class DealFormMap case class DealFormMap(limit: Option[Int], filter: Option[DealFormFilterMap]) case class DealFormFilterMap(date: Option[String], code: Option[String]) implicit val dealFormMapReads: Reads[DealFormMap] = ( (JsPath \ "limit").readNullable[Int] and (JsPath \ "filter").readNullable[DealFormFilterMap] )(DealFormMap) implicit val dealFormFilterMapReads: Reads[DealFormFilterMap] = ( (JsPath \ "date").readNullable[String] and (JsPath \ "code").readNullable[String] )(DealFormFilterMap) JSON in question and parsing attempt val str = """{"limit":10,"filter":{"date":"2014-10-27"}}""" val frm = Json.parse(str).as[DealFormMap] causes a cryptic error stack that I just can't seem to crack play.api.Application$$anon$1: Execution exception[[NullPointerException: null]] at play.api.Application$class.handleError(Application.scala:296) ~[play_2.11-2.3.5.jar:2.3.5] at play.api.DefaultApplication.handleError(Application.scala:402) [play_2.11-2.3.5.jar:2.3.5] at play.core.server.netty.PlayDefaultUpstreamHandler$$anonfun$14$$anonfun$apply$1.applyOrElse(PlayDefaultUpstreamHandler.scala:205) [play_2.11-2.3.5.jar:2.3.5] at play.core.server.netty.PlayDefaultUpstreamHandler$$anonfun$14$$anonfun$apply$1.applyOrElse(PlayDefaultUpstreamHandler.scala:202) [play_2.11-2.3.5.jar:2.3.5] at scala.runtime.AbstractPartialFunction.apply(AbstractPartialFunction.scala:36) [scala-library-2.11.2.jar:na] Caused by: java.lang.NullPointerException: null at play.api.libs.json.PathReads$$anonfun$nullable$1$$anonfun$apply$7$$anonfun$apply$9.apply(JsConstraints.scala:65) ~[play-json_2.11-2.3.5.jar:2.3.5] at play.api.libs.json.PathReads$$anonfun$nulla